Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933532.1_cds_XP_016479783.1_71289
CDS Infomation

[gene=LOC107801034] [db_xref=GeneID:107801034] [protein=calcium-dependent protein kinase 26-like] [protein_id=XP_016479783.1] [location=complement(join(3372..3494,4134..4358,4739..4906,5080..5195,5657..5809,5913..6056,7070..7964))] [gbkey=CDS]
Sequence

ATGGGGAACAATTGTGTTCATGCAAAGATCTCAAAGGATGGATTCTTCAGCTCCATTTGG
TGGTCGCGATCACCAGATATGATCACGTATAAGAAAAAGGAAAGCGGTTCCCAAACATCT
ACTACAGAGAAAGAGCCTGAAGATCCTAATTCTGTTCAGAATAAGCCTCCTGAATTGGTG
AAGATAGAGAGTAGACCGTCCGAGCAGGTGATCATCATCGTAAAGGATGAGATGAAAGAT
GCACGAGTGGAAGACATGATCAAGATAAAAGTTGATTTGAAACCTGCACAAATGTTGGGG
GGATCTGAAAAGGCTAAGCCGGCAGAGGCTGCAAAAGCAAGGAAGCCTCACAATGTGAAG
AGGATGGAAAGTGCAGGACTCCAGGTTGATTCCGTATTGAAAACCAAAACTGGTCATCTA
AAGGAGCACTATAATTTGGGGGAAAAGCTCGGACATGGCCAATTTGGTACCACATTCCTA
TGTGTAGAAAAGGCGACAGGAAAGAAGTATGCTTGTAAATCAATTGCAAAAAGGAAGTTG
TTGACAGATGAAGATGTGGAAGATGTAAGGAGAGAAATCCAGATCATGCATCACTTGTCG
GGGAATCCTAATGTCATTTCAATAAAAGGGGCTTATGAGGATGCTGTGGCAGTTCATGTC
GTGATGGAATTATGTACCGGAGGTGAACTCTTTGATCGGATTGTTAAGAGGGGGCATTAC
TCCGAGAGACAGGCTGCTGAGCTTGCAAGAACAATAGTTGGTGTGGTAGAAGCTTGCCGC
TCTCTTGGAGTCATGCATCGGGACCTTAAGCCTGAAAATTTTCTATTTATCAATGAGGAC
GAGGATTCACCTCTTAAGACTATAGATTTTGGGCTATCTGTATTCTTCAAGCCAGGGAAA
ATATTCGATGATGTTGTTGGAAGCCCTTATTATGTTGCTCCAGAAGTTCTGCGTAAGCGT
TATGGTCCAGAGGCTGATATCTGGAGTGCAGGTGTTATAATTTACATTCTTCTAAGCGGC
GTTCCTCCATTTTGGGGTGAAAGTGAGCAGGAAATATTTGATGAGGTTTTACATGGTGAT
ATAGACTTCGAGTTGGATCCTTGGCCTAAAATCTCTCAAGGTGCAAAGGACTTGGTTAGG
AGAATGCTTGTCAGAGACCCCAGAAAACGACTAACAGCACATGAAGTTTTATGTCATCCT
TGGGTGCAGATTGAAGGTGTGGCCCCAGATAAGCCTCTCGATTCTGCAATATTGACTCGC
TTAACACAGTTTTCTGCTATGAACAAGTTGAAGAAAATGGCTATCAGGGTTATTGCAGAG
AAACTTTCTGAAGAGGAAATCGCTGGCTTGAAAGAGATGTTCAAAATGATTGACACAGAT
AACAGTGGCCAAATTACTTTCGATGAACTAAAGATTGGATTAAAGAAATTTGGAGCTAAT
CTTAATGAATCAGAGATACACGACTTGATGAAGGCTGCGGACATTGACAATAGCGGAACA
ATTGACTATGGGGAGTTCGTAGCTGCAATGTTGCATGCCAACAAAATCGAGAAGGAAGAT
TATTTGTTTGCAGCTTTTTCATACTTCGACAAAGATGGAAGTGGTTATATTACAGCTGAT
GAGCTTCAAAAGGCTTGTGAAGAATTCGGCATTGAGGATGTCCACTGGGAAGAAATGATT
CAAGAAGCTGACCAAGACAATGATGGTCGGATAGATTACAATGAGTTTGTGGCCATGATG
CACAAAGGAAATGCAGACTTGGGTAAGAAACGGTTGCCAAATAATTTTAACATCGGATTT
AGGGAGGCATTGGAGGTCTGCTGA

Peptide Sequence

PEP ID

XP_016479783.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 26-like [Nicotiana tabacum]
Sequence

MGNNCVHAKISKDGFFSSIWWSRSPDMITYKKKESGSQTSTTEKEPEDPNSVQNKPPELV
KIESRPSEQVIIIVKDEMKDARVEDMIKIKVDLKPAQMLGGSEKAKPAEAAKARKPHNVK
RMESAGLQVDSVLKTKTGHLKEHYNLGEKLGHGQFGTTFLCVEKATGKKYACKSIAKRKL
LTDEDVEDVRREIQIMHHLSGNPNVISIKGAYEDAVAVHVVMELCTGGELFDRIVKRGHY
SERQAAELARTIVGVVEACRSLGVMHRDLKPENFLFINEDEDSPLKTIDFGLSVFFKPGK
IFDDVVGSPYYVAPEVLRKRYGPEADIWSAGVIIYILLSGVPPFWGESEQEIFDEVLHGD
IDFELDPWPKISQGAKDLVRRMLVRDPRKRLTAHEVLCHPWVQIEGVAPDKPLDSAILTR
LTQFSAMNKLKKMAIRVIAEKLSEEEIAGLKEMFKMIDTDNSGQITFDELKIGLKKFGAN
LNESEIHDLMKAADIDNSGTIDYGEFVAAMLHANKIEKEDYLFAAFSYFDKDGSGYITAD
ELQKACEEFGIEDVHWEEMIQEADQDNDGRIDYNEFVAMMHKGNADLGKKRLPNNFNIGF
REALEVC

Transcript Sequence

Gene sequence data has not been registered.